alchemist-incarnation-biochemistry/it.unibo.alchemist.model.implementations.conditions/BiomolPresentInCell

BiomolPresentInCell

open class BiomolPresentInCell : GenericMoleculePresent<T>

Constructors

BiomolPresentInCell

open fun BiomolPresentInCell( node: Node<Double>, biomol: Molecule, concentration: Double)

Functions

open fun cloneCondition(node: Node<T>, reaction: Reaction<T>): Condition<T>

open fun cloneCondition(node: Node<T>, reaction: Reaction<T>): GenericMoleculePresent<T>

open fun getContext(): Context

abstract fun getContext(): Context

getInboundDependencies

fun getInboundDependencies(): ListSet<out Dependency>

getPropensityContribution

open fun getPropensityContribution(): Double

Propensity influence is computed through the binomial coefficient.

abstract fun getPropensityContribution(): Double

open fun getQuantity(): T

Allows to access the threshold.

open fun isValid(): Boolean

abstract fun isValid(): Boolean

open fun reactionReady()

open fun toString(): String

open fun toString(): String

Properties

val molecule: Molecule

val node: Node<T>